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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3158877_3158995_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3158877 - 3158995

Intron Length:

119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTATTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

CTGTTCTTAATG

Flanking Amino Acid:

FPSSTTSSKQASFRSVNQQS

Intron Amino Acid Position:

1660

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

69.9

41.1

Major BPS

0.92

0.9

86.2

29.1

Major PPT

81.4

0.71

0.8

74.4

40.4

Minor 5ss

32.4

-2

3.2

43.2

Minor BPS

69.5

0.47

1.4

66.18

42.5

Associated Gene:

Gene:

NCAPD3

Ensembl Gene ID:

ENSAPLG00000010868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011386

3155542 - 3184261

28720