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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3159528_3160260_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3159528 - 3160260

Intron Length:

733

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGTTGGG

5'SS Class:

major

3'SS Sequence:

TTCTTTTCTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

CTATTGTTACAT

Flanking Amino Acid:

QEHASALQAEQPPSLETAVP

Intron Amino Acid Position:

1558

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.1

43.3

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

87.8

0.85

0.6

84.9

22.8

Minor 5ss

25.3

-2.8

3.2

31.5

42.7

Minor BPS

45.1

-0.3

2.3

65.06

45.4

Associated Gene:

Gene:

NCAPD3

Ensembl Gene ID:

ENSAPLG00000010868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011386

3155542 - 3184261

28720