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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3160417_3160853_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3160417 - 3160853

Intron Length:

437

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

CTTATTGCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

CATTCCTTATTG

Flanking Amino Acid:

ALRDLMNYLREMMQDYRNEI

Intron Amino Acid Position:

1506

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

66.1

40.1

Major BPS

82.1

0.8

71.6

36.4

Major PPT

78.2

0.63

0.9

69.4

41.6

Minor 5ss

29.4

-2.4

3.3

Minor BPS

62.6

0.26

1.7

64.27

Associated Gene:

Gene:

NCAPD3

Ensembl Gene ID:

ENSAPLG00000010868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011386

3155542 - 3184261

28720