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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3160965_3161532_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3160965 - 3161532

Intron Length:

568

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTAAAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

CCTTGTTTAAAA

Flanking Amino Acid:

QVAQKKLISQVQKKNFVENI

Intron Amino Acid Position:

1469

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.3

1.04

0.8

79.7

35.4

Major BPS

79.2

0.73

75.3

39.4

Major PPT

59.3

0.21

1.2

62.2

41.6

Minor 5ss

-1.9

3.2

43.9

Minor BPS

53.6

0.11

1.9

63.66

43.2

Associated Gene:

Gene:

NCAPD3

Ensembl Gene ID:

ENSAPLG00000010868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011386

3155542 - 3184261

28720