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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3162490_3163740_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3162490 - 3163740

Intron Length:

1251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATAC

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGAAAAT

U12 Branch Point Sequence:

TGTCTGGGAAAA

Flanking Amino Acid:

VLVDPNPDIARFGEFCLVHL

Intron Amino Acid Position:

1311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

74.5

29.8

Major BPS

45.1

-0.3

1.3

47.4

Major PPT

84.3

0.77

0.7

76.2

32.4

Minor 5ss

37.6

-1.4

3.2

49.9

46.6

Minor BPS

36.7

-1

2.4

51.4

39.8

Associated Gene:

Gene:

NCAPD3

Ensembl Gene ID:

ENSAPLG00000010868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011386

3155542 - 3184261

28720