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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3163821_3164586_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3163821 - 3164586

Intron Length:

766

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

CCTATCCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

CTATCCTTACAG

Flanking Amino Acid:

TLILLTNLLQEEFVKWKDCL

Intron Amino Acid Position:

1285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

77.9

0.69

78.3

31.3

Major PPT

79.4

0.66

0.8

72.2

32.4

Minor 5ss

31.7

-2.1

3.1

39.7

45.9

Minor BPS

56.1

0.05

1.9

61.4

Associated Gene:

Gene:

NCAPD3

Ensembl Gene ID:

ENSAPLG00000010868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011386

3155542 - 3184261

28720