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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3168534_3168871_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3168534 - 3168871

Intron Length:

338

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

GCAGCATTAATT

Flanking Amino Acid:

KVIESWDSVSRQQNVSTDTI

Intron Amino Acid Position:

1026

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

82.9

0.74

0.9

80.2

37.3

Minor 5ss

49.9

-0

2.4

66.4

45.1

Minor BPS

54.1

0.21

1.7

66.65

Associated Gene:

Gene:

NCAPD3

Ensembl Gene ID:

ENSAPLG00000010868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011386

3155542 - 3184261

28720