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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3170783_3171538_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3170783 - 3171538

Intron Length:

756

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

GCATTTCTCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATGTTTCTAATA

Flanking Amino Acid:

ALQSITELLVSQHDNVLVQK

Intron Amino Acid Position:

889

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

0.9

74.8

29.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

75.7

0.58

0.9

37.1

Minor 5ss

27.5

-2.6

2.7

28.2

37.3

Minor BPS

55.4

0.16

1.6

65.47

35.4

Associated Gene:

Gene:

NCAPD3

Ensembl Gene ID:

ENSAPLG00000010868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011386

3155542 - 3184261

28720