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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3178259_3179405_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3178259 - 3179405

Intron Length:

1147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

TGAACGTGAAGA

Flanking Amino Acid:

CSPLHGTENKVLRCVFQRIL

Intron Amino Acid Position:

575

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

81.3

30.4

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

85.8

0.81

0.7

77.3

31.4

Minor 5ss

35.7

-1.6

3.7

55.7

48.5

Minor BPS

42.8

-0.5

2.3

54.92

43.2

Associated Gene:

Gene:

NCAPD3

Ensembl Gene ID:

ENSAPLG00000010868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011386

3155542 - 3184261

28720