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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3188495_3189243_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3188495 - 3189243

Intron Length:

749

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CTTCACGTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAC

U12 Branch Point Sequence:

CCTTCCTTCACG

Flanking Amino Acid:

LHIEFEYNKSKYHLKDVIVG

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

73.6

37.1

Major BPS

68.7

0.47

1.2

63.1

44.5

Major PPT

65.3

0.35

1.1

57.5

42.9

Minor 5ss

34.7

-1.7

3.2

43.8

Minor BPS

64.4

0.31

1.9

66.67

47.1

Associated Gene:

Gene:

VPS26B

Ensembl Gene ID:

ENSAPLG00000027512

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042200

3183865 - 3191126

7262