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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3189420_3190107_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3189420 - 3190107

Intron Length:

688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGATGG

5'SS Class:

strong_major

3'SS Sequence:

GTGCGTTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCACAT

U12 Branch Point Sequence:

CTGTGCTGATGG

Flanking Amino Acid:

YEIMDGAPVRGESIPIRLFL

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

68.5

39.2

Major BPS

77.7

0.69

83.3

27.7

Major PPT

75.6

0.58

68.8

41.9

Minor 5ss

31.9

-2.1

38.5

46.6

Minor BPS

39.2

-0.9

2.3

43.36

Associated Gene:

Gene:

VPS26B

Ensembl Gene ID:

ENSAPLG00000027512

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042200

3183865 - 3191126

7262