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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3190251_3190615_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3190251 - 3190615

Intron Length:

365

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTGCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

AAGCCCTGATGA

Flanking Amino Acid:

EEERRYFKQQEVVLWRKGDI

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.8

35.2

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

75.9

0.58

68.9

Minor 5ss

28.4

-2.5

2.8

34.6

41.3

Minor BPS

43.4

-0.5

1.9

49.58

40.8

Associated Gene:

Gene:

VPS26B

Ensembl Gene ID:

ENSAPLG00000027512

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042200

3183865 - 3191126

7262