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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3195468_3196145_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3195468 - 3196145

Intron Length:

678

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTGCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCACAT

U12 Branch Point Sequence:

ACTTGTTTCACA

Flanking Amino Acid:

KEPGIVAIVKIVKEAYPDHT

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.3

35.8

Major BPS

77.7

0.69

83.3

27.7

Major PPT

80.3

0.68

0.9

77.5

36.9

Minor 5ss

32.2

-2

3.3

41.8

45.1

Minor BPS

49.4

-0

2.2

64.77

42.4

Associated Gene:

Gene:

THYN1

Ensembl Gene ID:

ENSAPLG00000012009

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012522

3194487 - 3198726

4240