Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_25_3202865_3203258_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3202865 - 3203258

Intron Length:

394

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGACGC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAG

U12 Branch Point Sequence:

AGCTCCTCAGTG

Flanking Amino Acid:

GLSFGKKEKKVGWNSQPTRA

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

65.9

40.1

Major BPS

58.4

0.21

1.5

67.6

40.6

Major PPT

84.3

0.77

0.8

37.2

Minor 5ss

26.9

-2.7

2.9

33.5

41.8

Minor BPS

47.7

-0.3

1.8

50.9

43.5

Associated Gene:

Gene:

ACAD8

Ensembl Gene ID:

ENSAPLG00000012241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038643

3200613 - 3205887

5275

ENSAPLT00000012754

3197408 - 3205887

8480