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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3207947_3211771_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3207947 - 3211771

Intron Length:

3825

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGAGCC

5'SS Class:

major

3'SS Sequence:

CTTTCTCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

GGATGCTCATCT

Flanking Amino Acid:

LLGVLWLLARRFNWSELIPM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

63.2

36.7

Major BPS

79.7

0.74

79.6

35.6

Major PPT

84.5

0.78

0.7

77.4

31.3

Minor 5ss

24.9

-2.9

3.3

32.9

42.4

Minor BPS

45.3

-0.2

2.2

63.05

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012588

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013179

3207699 - 3235504

27806

ENSAPLT00000037132

3207699 - 3234831

27133

ENSAPLT00000034706

3207699 - 3234757

27059

ENSAPLT00000030631

3207699 - 3234648

26950