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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3215665_3215978_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3215665 - 3215978

Intron Length:

314

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTCCAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAGAAA

U12 Branch Point Sequence:

CCTTTTCCAACA

Flanking Amino Acid:

HLMPIVVPLQYKKGGPIIAV

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.16

0.7

89.2

23.6

Major BPS

53.7

0.09

1.4

64.3

39.6

Major PPT

77.6

0.62

0.8

73.4

30.2

Minor 5ss

25.7

-2.8

3.6

34.4

41.2

Minor BPS

47.5

-0.1

1.9

59.19

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012588

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034706

3207699 - 3234757

27059

ENSAPLT00000030631

3207699 - 3234648

26950

ENSAPLT00000013179

3207699 - 3235504

27806

ENSAPLT00000037132

3207699 - 3234831

27133