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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3216072_3218886_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3216072 - 3218886

Intron Length:

2815

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAATGTTG

5'SS Class:

major

3'SS Sequence:

CTTTTTAATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTCTTTTTAATT

Flanking Amino Acid:

DPNYMAYVKRALLSRGIVEL

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.1

63.2

43.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.2

0.66

0.9

78.8

33.4

Minor 5ss

-1.1

3.3

47.3

48.1

Minor BPS

0.74

1.2

78.3

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012588

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037132

3207699 - 3234831

27133

ENSAPLT00000034706

3207699 - 3234757

27059

ENSAPLT00000030631

3207699 - 3234648

26950

ENSAPLT00000013179

3207699 - 3235504

27806