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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3225182_3227008_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3225182 - 3227008

Intron Length:

1827

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGCACC

5'SS Class:

major

3'SS Sequence:

GCTTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTGAA

U12 Branch Point Sequence:

CATCCCAGATGT

Flanking Amino Acid:

GGPHYVFDADDYDAVLTEAG

Intron Amino Acid Position:

349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

66.2

39.6

Major BPS

54.3

0.11

1.4

49.1

46.3

Major PPT

86.5

0.82

0.7

84.1

30.8

Minor 5ss

35.7

-1.6

2.9

45.4

42.5

Minor BPS

40.1

-0.6

2.1

56.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012588

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030631

3207699 - 3234648

26950