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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3228703_3229586_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3228703 - 3229586

Intron Length:

884

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

TGCTCTTCCATT

Flanking Amino Acid:

TVELSLPEGQGFRQLRLLVE

Intron Amino Acid Position:

531

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.8

76.2

39.9

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

95.5

1.02

0.5

88.9

28.1

Minor 5ss

32.1

-2

3.1

40.6

45.6

Minor BPS

48.7

-0

68.3

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012588

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037132

3207699 - 3234831

27133

ENSAPLT00000034706

3207699 - 3234757

27059

ENSAPLT00000030631

3207699 - 3234648

26950

ENSAPLT00000013179

3207699 - 3235504

27806