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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3229666_3230826_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3229666 - 3230826

Intron Length:

1161

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTAG

5'SS Class:

strong_major

3'SS Sequence:

ATTGCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TCTTCATTACCC

Flanking Amino Acid:

YGLALNEQRKGLIGDVFLNK

Intron Amino Acid Position:

557

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.6

1.07

0.7

30.2

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

80.6

0.69

0.9

73.9

36.1

Minor 5ss

39.5

-1.2

2.8

48.7

47.5

Minor BPS

62.5

0.37

1.9

75.46

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012588

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037132

3207699 - 3234831

27133

ENSAPLT00000034706

3207699 - 3234757

27059

ENSAPLT00000030631

3207699 - 3234648

26950

ENSAPLT00000013179

3207699 - 3235504

27806