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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3238123_3239366_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

3238123 - 3239366

Intron Length:

1244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

GTCTCTGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

GGGTAATAAACA

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

Major BPS

70.8

0.52

70.6

31.6

Major PPT

78.4

0.64

0.9

72.4

37.7

Minor 5ss

33.1

-1.9

3.4

48.3

47.4

Minor BPS

45.2

-0.3

55.37

42.8

Associated Gene:

Gene:

B3GAT1

Ensembl Gene ID:

ENSAPLG00000008480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008817

3237166 - 3271296

34131