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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3239485_3245444_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3239485 - 3245444

Intron Length:

5960

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGCGT

5'SS Class:

major

3'SS Sequence:

CTGCTTTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAC

U12 Branch Point Sequence:

CAGCTAATGACT

Flanking Amino Acid:

LEPKAANCTKILVWHTRTEK

Intron Amino Acid Position:

307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

1.1

64.5

46.9

Major BPS

0.42

1.1

57.7

Major PPT

82.7

0.74

0.8

80.6

31.4

Minor 5ss

31.4

-2.1

3.6

47.8

47.7

Minor BPS

42.8

-0.4

1.8

55.15

40.5

Associated Gene:

Gene:

B3GAT1

Ensembl Gene ID:

ENSAPLG00000008480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008817

3237166 - 3271296

34131