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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3380571_3383788_F

Intron Information:

Intron Rank:

142133

Intron Class:

major

Intron Phase:

Intron Coordinates:

3380571 - 3383788

Intron Length:

3218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTTT

5'SS Class:

strong_major

3'SS Sequence:

GCTGTGTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTGTTTTTAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

90.3

22.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

65.2

0.34

1.1

57.2

47.5

Minor 5ss

45.5

-0.5

66.9

44.4

Minor BPS

65.9

0.36

1.4

67.73

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026533

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034026

3380508 - 3388866

8359