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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3425680_3427915_F

Intron Information:

Intron Rank:

136766

Intron Class:

major

Intron Phase:

Intron Coordinates:

3425680 - 3427915

Intron Length:

2236

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGAGAG

5'SS Class:

major

3'SS Sequence:

TTTCCTCGTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

AATGTCTCAAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

0.9

63.9

36.2

Major BPS

0.75

78.6

Major PPT

81.5

0.71

0.9

31.6

Minor 5ss

24.5

-2.9

3.1

38.1

Minor BPS

47.6

-0.2

1.9

57.63

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023670

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048444

3425598 - 3428896

3299