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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3482148_3487501_F

Intron Information:

Intron Rank:

130451

Intron Class:

major

Intron Phase:

Intron Coordinates:

3482148 - 3487501

Intron Length:

5354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTCTGTATC

5'SS Class:

major

3'SS Sequence:

TCTTTCTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTAAAT

U12 Branch Point Sequence:

GGGACCCTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.6

0.42

1.3

70.6

39.7

Major BPS

57.4

0.18

1.1

64.9

37.3

Major PPT

86.2

0.81

0.6

85.4

21.9

Minor 5ss

41.9

-0.9

2.6

51.6

39.3

Minor BPS

0.01

1.9

65.06

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020171

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037408

3448863 - 3487990

39128

ENSAPLT00000044707

3478914 - 3492252

13339