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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3489067_3489557_F

Intron Information:

Intron Rank:

130446

Intron Class:

major

Intron Phase:

Intron Coordinates:

3489067 - 3489557

Intron Length:

491

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTGGAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

AAGGCTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

72.7

44.5

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

0.27

1.2

66.1

38.9

Minor 5ss

39.7

-1.2

3.2

57.4

46.9

Minor BPS

63.7

0.51

1.4

70.96

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020171

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044707

3478914 - 3492252

13339

ENSAPLT00000033364

3488955 - 3492252

3298