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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3489700_3490010_F

Intron Information:

Intron Rank:

130447

Intron Class:

major

Intron Phase:

Intron Coordinates:

3489700 - 3490010

Intron Length:

311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TTTTCTACTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTGAT

U12 Branch Point Sequence:

CCGTTTTCTACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.1

77.4

37.4

Major BPS

72.4

0.56

1.1

63.1

44.4

Major PPT

87.1

0.84

0.7

82.3

27.9

Minor 5ss

40.4

-1.1

2.8

53.8

42.8

Minor BPS

45.9

-0.2

1.8

58.62

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020171

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044707

3478914 - 3492252

13339

ENSAPLT00000033364

3488955 - 3492252

3298