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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3533878_3534942_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3533878 - 3534942

Intron Length:

1065

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGAAA

5'SS Class:

major

3'SS Sequence:

CTTCTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGAAAAT

U12 Branch Point Sequence:

TGGGGATGAAAA

Flanking Amino Acid:

LQDLVNSPPQEETSQQQEAA

Intron Amino Acid Position:

661

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.2

41.4

Major BPS

55.4

0.14

1.3

61.7

41.5

Major PPT

0.81

0.7

80.8

24.4

Minor 5ss

-1.6

3.3

48.2

47.5

Minor BPS

39.2

-0.8

2.1

47.52

41.9

Associated Gene:

Gene:

SIK2

Ensembl Gene ID:

ENSAPLG00000013801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040561

3531036 - 3576161

45126

ENSAPLT00000014415

3531036 - 3575854

44819