Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_25_3535107_3535215_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3535107 - 3535215

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAAAC

5'SS Class:

major

3'SS Sequence:

TACTCTTGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

TTTTGCTCTACT

Flanking Amino Acid:

RRASDTSLTQGIVAFRQHLQ

Intron Amino Acid Position:

606

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.1

75.1

35.1

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

77.1

0.61

0.9

71.9

37.7

Minor 5ss

39.3

-1.2

2.9

51.9

44.9

Minor BPS

55.7

0.26

2.3

84.68

41.8

Associated Gene:

Gene:

SIK2

Ensembl Gene ID:

ENSAPLG00000013801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035639

3531036 - 3576161

45126

ENSAPLT00000014415

3531036 - 3575854

44819

ENSAPLT00000040561

3531036 - 3576161

45126