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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3541123_3541990_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3541123 - 3541990

Intron Length:

868

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAACAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACACAT

U12 Branch Point Sequence:

CACACACAAACT

Flanking Amino Acid:

LGIDQQKTIESLQNKSYNHF

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

68.4

36.7

Major BPS

57.6

0.19

64.6

32.2

Major PPT

1.01

0.6

88.4

28.7

Minor 5ss

31.6

-2.1

3.2

41.7

Minor BPS

40.9

-0.6

2.1

55.77

45.7

Associated Gene:

Gene:

SIK2

Ensembl Gene ID:

ENSAPLG00000013801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035639

3531036 - 3576161

45126

ENSAPLT00000014415

3531036 - 3575854

44819

ENSAPLT00000040561

3531036 - 3576161

45126