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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3544355_3546406_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3544355 - 3546406

Intron Length:

2052

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATTGTTA

5'SS Class:

weak_major

3'SS Sequence:

TCTTTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACAAAT

U12 Branch Point Sequence:

TCTTTTTTTACA

Flanking Amino Acid:

QYEGPQLDIWSMGVVLYVLV

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.9

0.33

1.1

61.2

39.9

Major BPS

60.7

0.27

65.3

28.1

Major PPT

1.01

0.5

90.9

21.2

Minor 5ss

-0.4

3.1

55.3

48.9

Minor BPS

65.1

0.47

1.6

74.12

37.8

Associated Gene:

Gene:

SIK2

Ensembl Gene ID:

ENSAPLG00000013801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040561

3531036 - 3576161

45126

ENSAPLT00000035639

3531036 - 3576161

45126

ENSAPLT00000014415

3531036 - 3575854

44819