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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3546532_3556941_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3546532 - 3556941

Intron Length:

10410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCCAGA

5'SS Class:

major

3'SS Sequence:

AATTTCTTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

TTCCCCTTAATT

Flanking Amino Acid:

LDNNMNIKIADFGFGNFYKS

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.3

0.38

1.3

46.4

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

79.2

0.66

0.9

36.4

Minor 5ss

43.2

-0.7

58.2

45.9

Minor BPS

81.5

1.07

1.1

89.41

35.2

Associated Gene:

Gene:

SIK2

Ensembl Gene ID:

ENSAPLG00000013801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035639

3531036 - 3576161

45126

ENSAPLT00000014415

3531036 - 3575854

44819

ENSAPLT00000040561

3531036 - 3576161

45126