Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_25_355424_356090_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

355424 - 356090

Intron Length:

667

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTAAAA

5'SS Class:

major

3'SS Sequence:

TTTCCCTTAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

TTTCCCTTAAAA

Flanking Amino Acid:

LSVEVRNLEPGEMYKFRVIA

Intron Amino Acid Position:

792

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

71.5

33.3

Major BPS

77.7

0.69

30.2

Major PPT

69.7

0.44

1.1

71.9

31.6

Minor 5ss

38.9

-1.2

2.8

48.9

46.9

Minor BPS

80.4

0.95

1.2

86.76

30.7

Associated Gene:

Gene:

CDON

Ensembl Gene ID:

ENSAPLG00000014642

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029285

338790 - 373993

35204

ENSAPLT00000018082

338790 - 373993

35204

ENSAPLT00000015293

338790 - 373993

35204