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Intron Name: Anas_platyrhynchos_platyrhynchos_25_358108_359244_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

358108 - 359244

Intron Length:

1137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

AAACATTTCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

AATCCCTGAATT

Flanking Amino Acid:

PAMLTFRTSKERTSSSKNTQ

Intron Amino Acid Position:

677

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

62.4

0.28

0.9

58.9

41.6

Minor 5ss

31.6

-2.1

3.3

41.1

45.4

Minor BPS

0.61

1.4

78.69

36.8

Associated Gene:

Gene:

CDON

Ensembl Gene ID:

ENSAPLG00000014642

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029285

338790 - 373993

35204

ENSAPLT00000015293

338790 - 373993

35204