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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3585848_3586126_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3585848 - 3586126

Intron Length:

279

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAATGAGT

5'SS Class:

major

3'SS Sequence:

TTTTTTCTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

AGAAACTTATCT

Flanking Amino Acid:

KNNFICKYSLEKPTTAPIEN

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

42.5

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

91.4

0.93

0.6

85.5

29.2

Minor 5ss

34.2

-1.8

3.3

46.1

Minor BPS

49.5

0.04

1.8

66.56

43.1

Associated Gene:

Gene:

LAYN

Ensembl Gene ID:

ENSAPLG00000013654

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014224

3583546 - 3590025

6480