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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3587908_3589958_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3587908 - 3589958

Intron Length:

2051

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGGCTG

5'SS Class:

major

3'SS Sequence:

TCCATTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

ATTTCTGTAACG

Flanking Amino Acid:

GWATGTRLPGGQTVCRGGTQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

64.7

46.6

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

81.6

0.71

0.8

76.4

32.1

Minor 5ss

34.8

-1.7

3.4

48.4

47.2

Minor BPS

63.5

0.29

2.1

73.4

39.4

Associated Gene:

Gene:

LAYN

Ensembl Gene ID:

ENSAPLG00000013654

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014224

3583546 - 3590025

6480