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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3610570_3611095_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
3610570 - 3611095

Intron Length:
526

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGGATT

5'SS Class:
strong_major

3'SS Sequence:
TACTCCTAACTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AATTCAA

U12 Branch Point Sequence:
GTACTCCTAACT

Flanking Amino Acid:
LDNPSRGQAFRCIRINKHQT

Intron Amino Acid Position:
58

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
93.7
1.03
0.8
91.6
26.4

Major BPS
74.2
0.6
0.9
75.7
28

Major PPT
62.3
0.28
1
56.3
38.7

Minor 5ss
38.2
-1.3
3.4
56.9
47.4

Minor BPS
59.3
0.37
1.7
76.08
39.7

Associated Gene:

Gene:
BTG4

Ensembl Gene ID:

Chromosome:
25

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3610375 - 3611940
1566