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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3657212_3657293_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3657212 - 3657293

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAACC

5'SS Class:

strong_major

3'SS Sequence:

CTGTCGTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

TTGTTTGCAATC

Flanking Amino Acid:

LQMGGKLEMQVLNSCRITTP

Intron Amino Acid Position:

399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.8

77.7

30.1

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

78.7

0.65

0.9

72.5

37.6

Minor 5ss

29.3

-2.4

2.8

35.3

40.9

Minor BPS

46.5

-0.2

2.1

61.19

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020986

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032889

3655192 - 3664344

9153

ENSAPLT00000032603

3655192 - 3661766

6575