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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3658489_3659951_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3658489 - 3659951

Intron Length:

1463

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTCCGCT

5'SS Class:

weak_major

3'SS Sequence:

TGTTTTATTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

ACTTATTTAAAG

Flanking Amino Acid:

KLLAPDENGNRLLHKAVAQG

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.1

0.07

1.4

53.3

44.1

Major BPS

81.6

0.78

0.8

24.9

Major PPT

85.9

0.81

0.8

78.1

40.1

Minor 5ss

-0.4

66.2

44.8

Minor BPS

55.8

0.04

1.7

59.9

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020986

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032889

3655192 - 3664344

9153

ENSAPLT00000032603

3655192 - 3661766

6575