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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3660590_3660728_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3660590 - 3660728

Intron Length:

139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCATA

5'SS Class:

strong_major

3'SS Sequence:

GTTGCTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAT

U12 Branch Point Sequence:

TTTTTGTTGCTG

Flanking Amino Acid:

HPYTEKQLRQSKQSIGQTLK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

79.7

35.3

Major BPS

48.9

-0

1.3

39.1

Major PPT

76.9

0.61

73.1

42.1

Minor 5ss

-0.1

2.5

65.8

45.4

Minor BPS

38.4

-1

3.7

61.06

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020986

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032889

3655192 - 3664344

9153

ENSAPLT00000032603

3655192 - 3661766

6575