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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3706348_3706735_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3706348 - 3706735

Intron Length:

388

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAGGAGAA

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ACGGTTTTAATC

Flanking Amino Acid:

HNTSTTAATTVVLPHQTLPS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

62.6

38.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

90.8

0.92

0.6

85.1

29.7

Minor 5ss

28.8

-2.4

3.5

37.9

Minor BPS

53.6

0.09

1.4

54.95

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014435

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015042

3694452 - 3718155

23704