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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3712312_3714425_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3712312 - 3714425

Intron Length:

2114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTCACTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAA

U12 Branch Point Sequence:

TTCTCTGTCACT

Flanking Amino Acid:

AMYGYAQVLQVILSLGFPLD

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

76.9

33.7

Major BPS

68.7

0.47

0.9

67.9

Major PPT

71.9

0.49

0.9

62.9

38.6

Minor 5ss

31.4

-2.1

3.1

39.2

46.2

Minor BPS

51.5

0.13

2.4

78.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014435

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015042

3694452 - 3718155

23704