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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3715304_3717519_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3715304 - 3717519

Intron Length:

2216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

CCCCTTGCATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAC

U12 Branch Point Sequence:

TTTCTCTTACTT

Flanking Amino Acid:

FKSRDFVNSKAHGNTALHMA

Intron Amino Acid Position:

441

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

38.4

Major BPS

69.2

0.48

37.1

Major PPT

66.8

0.38

0.9

65.3

34.9

Minor 5ss

28.1

-2.5

2.7

31.4

42.8

Minor BPS

67.8

0.64

1.6

84.73

36.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014435

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015042

3694452 - 3718155

23704