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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3717685_3718083_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3717685 - 3718083

Intron Length:

399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTCCT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTTTGGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TAAACTTTTACA

Flanking Amino Acid:

MAPPGKAGDQIRHLLKKGKI

Intron Amino Acid Position:

496

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

75.5

40.4

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

83.2

0.75

0.9

81.1

35.9

Minor 5ss

35.8

-1.6

3.2

51.3

45.1

Minor BPS

57.2

0.22

1.7

66.19

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014435

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015042

3694452 - 3718155

23704