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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3724602_3725767_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3724602 - 3725767

Intron Length:

1166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTACA

5'SS Class:

major

3'SS Sequence:

CCTTCCCTCCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAC

U12 Branch Point Sequence:

CTTGTTTTACCT

Flanking Amino Acid:

FSESVSPPHPVPFDAEPISS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

72.7

38.3

Major BPS

68.8

0.47

1.2

63.4

Major PPT

73.4

0.53

0.7

65.5

30.4

Minor 5ss

-2.2

2.7

35.2

40.7

Minor BPS

56.6

0.29

1.7

74.22

43.6

Associated Gene:

Gene:

COLCA2

Ensembl Gene ID:

ENSAPLG00000014426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015021

3723663 - 3729206

5544