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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3733335_3734035_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3733335 - 3734035

Intron Length:

701

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

CTGACCGCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

TTTTTCTGACCG

Flanking Amino Acid:

MPGSPTTAGYYG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

84.7

28.3

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

61.4

0.26

53.3

36.6

Minor 5ss

37.2

-1.4

3.5

49.2

Minor BPS

60.8

0.2

1.8

71.74

41.2

Associated Gene:

Gene:

C11orf53

Ensembl Gene ID:

ENSAPLG00000014422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015019

3731996 - 3734042

2047