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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3743803_3743969_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3743803 - 3743969

Intron Length:

167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCCCGTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

GGCGTCTCACCC

Flanking Amino Acid:

NFLCLWEYCERSFDNPEWFY

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.3

35.8

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

70.6

0.46

0.9

69.6

31.2

Minor 5ss

32.2

-2

3.3

41.8

45.1

Minor BPS

43.2

-0.5

1.8

47.24

42.2

Associated Gene:

Gene:

HINFP

Ensembl Gene ID:

ENSAPLG00000014291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014902

3743331 - 3747319

3989