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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3745021_3745117_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3745021 - 3745117

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

CGTTTCCTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTGCAG

U12 Branch Point Sequence:

CGCCCTGCAGCC

Flanking Amino Acid:

RPFKCDYCDYSCKNLIDLRK

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.9

33.4

Major BPS

40.6

-0.5

1.6

48.7

45.1

Major PPT

80.1

0.68

0.8

77.7

31.1

Minor 5ss

-2.9

3.3

32.7

42.5

Minor BPS

36.3

-1

2.1

40.25

39.6

Associated Gene:

Gene:

HINFP

Ensembl Gene ID:

ENSAPLG00000014291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014902

3743331 - 3747319

3989