Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_25_3745651_3745780_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3745651 - 3745780

Intron Length:

130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGCAC

5'SS Class:

major

3'SS Sequence:

GTCCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

CCAAATGTGATT

Flanking Amino Acid:

FKWPSGHPRFRYKEHEDGYM

Intron Amino Acid Position:

369

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.1

42.1

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

0.41

0.8

58.1

33.2

Minor 5ss

-2.3

3.4

41.6

45.1

Minor BPS

39.1

-0.7

48.29

39.2

Associated Gene:

Gene:

HINFP

Ensembl Gene ID:

ENSAPLG00000014291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014902

3743331 - 3747319

3989