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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3750328_3751155_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3750328 - 3751155

Intron Length:

828

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

GCGTCTCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAAAAA

U12 Branch Point Sequence:

CCCTGGTGAGCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

72.1

31.2

Major BPS

47.9

-0.1

0.9

51.7

28.4

Major PPT

67.6

0.4

0.9

38.5

Minor 5ss

26.3

-2.7

3.1

33.4

Minor BPS

37.2

-0.8

2.4

51.75

48.7

Associated Gene:

Gene:

ABCG4

Ensembl Gene ID:

ENSAPLG00000024795

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047365

3750187 - 3761715

11529

ENSAPLT00000026187

3750187 - 3761715

11529